I am Berk Yilmaz

        Currently pursuing an M.S. in Electrical Engineering with a specialization in Data-Driven Analysis and Computation @ Columbia University in the City of New York. I completed a dual undergraduate degree, earning a B.S. in Electrical Engineering with honors from NJIT (GPA: 3.82, Magna Cum Laude) and a degree in Electronics and Communications Engineering from Istanbul Technical University (GPA: 3.88, graduated top of my department).

I gained experience as a hardware engineer, designing PCBs for organizations like ROKETSAN, TUBITAK and SpaceCO which co-founded with my team and NASA engineers. And I worked as a research assistant @ NJIT on Expended Natural Language Processing, Computer Vision applications in the context of CARLA simulation where I gained experience on NVIDIA Jetson AI devices, PyTorch, TensorFlow and Python libraries such as NumPy, Pandas and Keras.

In my MS program @ Columbia University I took Neural Networks and Deep Learning, Big Data Analytics, Statistical Learning in Biology and Information Systems, Data Science in Finance and Insurance, Reinforcement Learning, Advanced Deep Learning, Embedded AI and Deep Learning on the Edge, with Labs Using Nvidia Nano Devices courses and involved in 10 + machine learning projects.

I believe that the advancement of AI systems requires substantial progress in energy efficiency. With my background in Electrical and Communications Engineering, I am deeply interested in developing innovative and energy-efficient AI algorithms.

Coding, photography, and movies are among my favorite hobbies. In the future, I aim to focus on competitive programming, as I enjoy creating algorithms and the thought process behind them.

SKILLS

Python, C++, Matlab, Scikit, Numpy, Pandas, TensorFlow, Keras, R, Apache Spark, SQL, Google Cloud, Apache Hadoop, Linux, Statistics, Linear Algebra, Data Structures and Algorithms

Key Projects

Explore a curated selection of my best work. Please also check the Projects section to get more comprehensive look at my projects

Efficient Transformations in Deep Learning Convolutional Neural Networks

This study investigates the integration of signal processing transformations—Fast Fourier Transform (FFT), Walsh-Hadamard Transform (WHT), and Discrete Cosine Transform (DCT) within the ResNet50 convolutional neural network (CNN) model for image classification. The primary objective is to assess the trade-offs between computational efficiency, energy consumption, and classification accuracy during training and inference. Using the CIFAR-100 dataset (100 classes, 60,000 images), experiments demonstrated that incorporating WHT significantly reduced energy consumption while improving accuracy. Specifically, a baseline ResNet50 model achieved a testing accuracy of 66%, consuming an average of 25,606 kJ per model. In contrast, a modified ResNet50 incorporating WHT in the early convolutional layers achieved 74% accuracy, and an enhanced version with WHT applied to both early and late layers achieved 79% accuracy, with an average energy consumption of only 39 kJ per model. These results demonstrate the potential of WHT as a highly efficient and effective approach for energy-constrained CNN applications.

PharMe: A Pharmaceutical Informed LLM

This study explored the application of Medical LLaMA-3-8B, a large language model pre-trained on the MIMIC-III dataset, as a resource tool for assisting healthcare providers in drug and treatment selection based on patient diagnoses. The model was fine-tuned on data sourced (324 Updates for 2024) from Drugs@FDA, specifically the FDA’s Purple Book database, which provides comprehensive information on approved drugs, novel treatments, and biosimilars.

To ensure the model remained current with the latest updates, an automated workflow was developed using Apache Airflow. This workflow facilitated periodic data pulls from the FDA database, processed and formatted the retrieved information, and incorporated it into the fine-tuning loop.

The resulting fine-tuned model, termed PharMe, demonstrated the ability to provide valuable recommendations when prompted with medical conditions, achieving a perplexity score on average of 17.4, compared to GPT-Neo’s score of 21.7. PharMe not only suggested commonly prescribed treatments but also identified the latest advancements, including novel therapies, and biosimilars.


Hierarchical Voting-Based Feature Selection and Ensemble Learning Model Scheme for Glioma Grading with Clinical and Molecular Characteristics and Experiments with PCA and SMOTE Techniques

Accurate grading of gliomas is essential for effective treatment planning and improved patient outcomes. This study presents a novel framework that combines hierarchical voting-based feature selection with ensemble learning to achieve robust classification of gliomas using molecular and clinical data. The method leverages diverse feature selection techniques alongside soft- voting ensemble models to identify the most impactful predictors while reducing redundancy and computational overhead. Evaluations using the TCGA and CGGA datasets highlight superior accuracy and cost- effectiveness compared to standard approaches like LASSO. By integrating advanced methodologies, this approach not only enhances classification reliability but also offers scalability for broader applications in biomedical data analysis. These findings underscore the potential for this framework to drive improved decision-making in clinical oncology and beyond.

Low-Cost Through-the-Wall Human Detection and Localization

NJIT Senior Design Showcase Runner-up

Designing ultra-wide band (UWB) radar and, integration tool incorporates a range of components, including a transmitter, receiver, and an UWB pulse generator. It uses millimeter wave-length (mmWave) radiation, part of the electromagnetic spectrum with wavelengths typically in the range of 8 GHz to 20GHz, has specific properties when it comes to penetration through walls and other solid objects. With utilizing the Doppler effect, it can still be observed with waves (including millimeter waves) that propagate through or around walls. It can be used to perform an evaluation of their potential applications in medical uses, and apart from life-saving operations, it can also be used in the military to see enemies behind walls. The application of the device is aimed at detecting the locations of individuals trapped under debris in catastrophic events such as earthquakes, with the objective being to maintain a stance of objective benevolence.

Removable Coating for In-Space Cold Welding Applications

Winner of NPWEE '21 Best Project

The present invention is a removable coating to enable cold welding in space applications. The base metal aluminum is prepared with a coating that prevents excessive oxidation of the metal within Earth’s atmosphere. Once in space, this coating is designed to be easily removable in order to reveal clean metal that can be pressed together to form strong, hermetic seals for manufacturing large structures in space.

Obtained Disclosure of Invention and New Technology at NASA

SpaceCo was founded funding from NASA and Arizona State University, in collaboration with NASA engineers.

Get more info about Space Construction Technologies

Project Showcase

PROJECTS

Experience

WORK EXPERIENCE

ML/AI Research Assistant @ NJIIT

Apr 2021 - Sep 2024

Co-Founder @ Space Construction Technologies (SpaceCO)

Sep 2023 - May 2024

Hardware Design Engineer @ TUBITAK BILGEM

Mar 2023 - Jul 2023

Hardware Engineering Intern @ ROKETSAN

Aug 2022 - Sep 2022

Electronics and Communications Engineering Intern @ TUBITAK BILGEM

Jun 2022 - Jul 2022

RESEARCH EXPERIENCE

L'SPACE NPWEE Researcher @ NASA

Jan 2021 - Apr 2021

L'SPACE MCA Researcher @ NASA

Sep 2020 - Dec 2020

Low-Cost Through-the-Wall Human Detection and Localization

PharMe: A Pharmaceutical Informed LLM

Hierarchical Voting-Based Feature Selection and Ensemble Learning Model Scheme for Glioma Grading with Clinical and Molecular Characteristics and Experiments with PCA and SMOTE Techniques

Efficient Transformations in Deep Learning Convolutional Neural Networks

Removable Coating for In-Space Cold Welding Applications

Radar Clutter Simulation with a Set Rotating Radar
NASA L'SPACE Mission Concept Academy Enceladus Lander
Capacitive Discharge Ignition System
VOLUNTEER EXPERIENCE

NASA Lucy Mission Ambassador @ NASA


May 2021 - Jun 2022

Students for the Exploration and Development of Space (SEDS) GEBZE Students

Guest Speaker @ COSMOS STORY
Predicting Creditworthiness with ML

Certifications

Programming Fundamentals by Duke University

Introduction to Artificial Intelligence (AI) by IBM

Getting Started with AI using IBM Watson by IBM

Building AI Powered Chatbots Without Programming by IBM

Supervised Machine Learning: Regression and Classification by Stanford University

Crash Course on Python by Google

Excel Skills for Business: Essentials by Macquarie University

Python for Data Science, AI & Development by IBM

NASA MCA Completion

NASA NPWEE Completion

HONORs and AWARDS

Istanbul Technical University 2022-2023 Spring Term High Honor List

Atahan Atay ’10 Memorial School Scholarship

New Jersey Institute of Technology Spring Term 2021-2022 Dean's List

Istanbul Technical University 2022-2023 Fall Term High Honor List

New Jersey Institute of Technology Fall Term 2021-2022 Dean's List

Istanbul Technical University 2020-2021 Spring Term High Honor List

New Jersey Institute of Technology Fall Term 2023-2024 Dean's List

New Jersey Institute of Technology Spring Term 2023-2024 Dean's List

NJIT Honors with Magna Cum Laude

NASA NPWEE First Place